install graph tool in Centos 7
hello, every one I want to install graph tool in CentOs 7, but graph tool has too many dependencies. Such as boost, the Centos 7 default repo only provide version 1.53, but graph tool requires 1.54 And centos 7 does not provide CGAL at all. So I want to ask you, does anyboy have installed graph tool in centos7, which repo do you use? I really do not want to compile all the dependencies through source code, it is a tough work! Simply using yum command is perfect! Many thanks. Zhao Jun
You might try the epel repositories to complete the dependencies. These are the packages available in fedora repackaged for centos. On Fri, Oct 9, 2015, 2:07 AM 俊 赵 <zhaojun12@outlook.com> wrote:
hello, every one
I want to install graph tool in CentOs 7, but graph tool has too many dependencies.
Such as boost, the Centos 7 default repo only provide version 1.53, but graph tool requires 1.54
And centos 7 does not provide CGAL at all.
So I want to ask you, does anyboy have installed graph tool in centos7, which repo do you use?
I really do not want to compile all the dependencies through source code, it is a tough work!
Simply using yum command is perfect!
Many thanks.
*Zhao Jun* _______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool
I compiled graph tool and most of its dependencies on Cent OS 6.5, and uploaded the binaries to anaconda: https://anaconda.org/ostrokach/graph-tool . If you are using the anaconda python distribution (which I highly recommend), you can install graph-tool by typing: conda config --add channels ostrokach conda install graph-tool I only tested it on Ubuntu 14.04, but it should work... On Fri, Oct 9, 2015 at 12:57 PM, Johann Goetz <theodore.goetz@gmail.com> wrote:
You might try the epel repositories to complete the dependencies. These are the packages available in fedora repackaged for centos.
On Fri, Oct 9, 2015, 2:07 AM 俊 赵 <zhaojun12@outlook.com> wrote:
hello, every one
I want to install graph tool in CentOs 7, but graph tool has too many dependencies.
Such as boost, the Centos 7 default repo only provide version 1.53, but graph tool requires 1.54
And centos 7 does not provide CGAL at all.
So I want to ask you, does anyboy have installed graph tool in centos7, which repo do you use?
I really do not want to compile all the dependencies through source code, it is a tough work!
Simply using yum command is perfect!
Many thanks.
*Zhao Jun* _______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool
_______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool
Thanks, but it seems that epel only supports boost 1.53, but graph tool needs 1.54 Zhao Jun From: theodore.goetz@gmail.com Date: Fri, 9 Oct 2015 16:57:13 +0000 To: graph-tool@skewed.de Subject: Re: [graph-tool] install graph tool in Centos 7 You might try the epel repositories to complete the dependencies. These are the packages available in fedora repackaged for centos. On Fri, Oct 9, 2015, 2:07 AM 俊 赵 <zhaojun12@outlook.com> wrote: hello, every one I want to install graph tool in CentOs 7, but graph tool has too many dependencies. Such as boost, the Centos 7 default repo only provide version 1.53, but graph tool requires 1.54 And centos 7 does not provide CGAL at all. So I want to ask you, does anyboy have installed graph tool in centos7, which repo do you use? I really do not want to compile all the dependencies through source code, it is a tough work! Simply using yum command is perfect! Many thanks. Zhao Jun _______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool _______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool
I compiled boost 1.58 and many other dependencies; they would get installed automatically into your conda environment when you type `conda install graph-tool`. Alternatively, you can compile everything from scratch using these conda recipes: https://github.com/ostrokach/conda-recipes-extra. Type `conda build graph-tool` and it will start compiling graph-tool together with all dependencies, including boost. You can have a separate boost installation in your conda environment, and it will not conflict with the version of boost installed on your system. I don't see the problem with EPEL only supporting boost 1.53? I run graph-tool on HPC clusters with different operating systems, and it seems to work fine. On Sat, Oct 10, 2015 at 1:15 AM, 俊 赵 <zhaojun12@outlook.com> wrote:
Thanks, but it seems that epel only supports boost 1.53, but graph tool needs 1.54
*Zhao Jun*
------------------------------ From: theodore.goetz@gmail.com Date: Fri, 9 Oct 2015 16:57:13 +0000 To: graph-tool@skewed.de Subject: Re: [graph-tool] install graph tool in Centos 7
You might try the epel repositories to complete the dependencies. These are the packages available in fedora repackaged for centos.
On Fri, Oct 9, 2015, 2:07 AM 俊 赵 <zhaojun12@outlook.com> wrote:
hello, every one
I want to install graph tool in CentOs 7, but graph tool has too many dependencies.
Such as boost, the Centos 7 default repo only provide version 1.53, but graph tool requires 1.54
And centos 7 does not provide CGAL at all.
So I want to ask you, does anyboy have installed graph tool in centos7, which repo do you use?
I really do not want to compile all the dependencies through source code, it is a tough work!
Simply using yum command is perfect!
Many thanks.
*Zhao Jun* _______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool
_______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool
_______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool
Many thanks, I will try. And yesterday I have installed Ubuntu 14.04 in my Workstation. Many thanks. Zhao Jun From: ostrokach@gmail.com Date: Sat, 10 Oct 2015 12:45:05 -0400 To: graph-tool@skewed.de Subject: Re: [graph-tool] install graph tool in Centos 7 I compiled boost 1.58 and many other dependencies; they would get installed automatically into your conda environment when you type `conda install graph-tool`. Alternatively, you can compile everything from scratch using these conda recipes: https://github.com/ostrokach/conda-recipes-extra. Type `conda build graph-tool` and it will start compiling graph-tool together with all dependencies, including boost. You can have a separate boost installation in your conda environment, and it will not conflict with the version of boost installed on your system. I don't see the problem with EPEL only supporting boost 1.53? I run graph-tool on HPC clusters with different operating systems, and it seems to work fine. On Sat, Oct 10, 2015 at 1:15 AM, 俊 赵 <zhaojun12@outlook.com> wrote: Thanks, but it seems that epel only supports boost 1.53, but graph tool needs 1.54 Zhao Jun From: theodore.goetz@gmail.com Date: Fri, 9 Oct 2015 16:57:13 +0000 To: graph-tool@skewed.de Subject: Re: [graph-tool] install graph tool in Centos 7 You might try the epel repositories to complete the dependencies. These are the packages available in fedora repackaged for centos. On Fri, Oct 9, 2015, 2:07 AM 俊 赵 <zhaojun12@outlook.com> wrote: hello, every one I want to install graph tool in CentOs 7, but graph tool has too many dependencies. Such as boost, the Centos 7 default repo only provide version 1.53, but graph tool requires 1.54 And centos 7 does not provide CGAL at all. So I want to ask you, does anyboy have installed graph tool in centos7, which repo do you use? I really do not want to compile all the dependencies through source code, it is a tough work! Simply using yum command is perfect! Many thanks. Zhao Jun _______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool _______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool _______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool _______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool
participants (3)
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Alexey Strokach -
Johann Goetz -
俊 赵