Graphviz layout issue - neato >2000 vertices
Hi, I am trying to do a layout of a 2,000 vertex graph with Graphviz and neato in Linux. This graph is a minimum spanning tree (MST) created from the topology module using integer edge weights for layout. I have not selected any options about edge length, etc. only specified 'neato' with png output. However, the output is an extremely bunch group of nodes in a circular region with no resolution of the edges. I am wondering if this is a GraphViz plotting issue or if this is a issue with the MST? Any help appreciated. -- View this message in context: http://main-discussion-list-for-the-graph-tool-project.982480.n3.nabble.com/... Sent from the Main discussion list for the graph-tool project mailing list archive at Nabble.com.
On 02/20/2014 02:33 PM, CitSci wrote:
Hi, I am trying to do a layout of a 2,000 vertex graph with Graphviz and neato in Linux.
This graph is a minimum spanning tree (MST) created from the topology module using integer edge weights for layout.
I have not selected any options about edge length, etc. only specified 'neato' with png output. However, the output is an extremely bunch group of nodes in a circular region with no resolution of the edges. I am wondering if this is a GraphViz plotting issue or if this is a issue with the MST? Any help appreciated.
Without a concrete example of what you mean, it is very hard to say what may be happening. Best, Tiago -- Tiago de Paula Peixoto <tiago@skewed.de>
Ok, I figured this out---it was an error in my weights code. -- View this message in context: http://main-discussion-list-for-the-graph-tool-project.982480.n3.nabble.com/... Sent from the Main discussion list for the graph-tool project mailing list archive at Nabble.com.
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Tiago de Paula Peixoto