Hi,
Is there a method to calculate the Dice or the Jaccard similarity between *all pairs of vertices* in the graph? Similar to the similarity_dice http://igraph.org/python/doc/igraph.GraphBase-class.html#similarity_dice and similarity_jaccard http://igraph.org/python/doc/igraph.GraphBase-class.html#similarity_jaccard methods in igraph?
I searched through graph_tool documentation, and google, but did not find anything.
Thanks, Alexey
And how about similarity_inverse_log_weighted http://igraph.org/python/doc/igraph.GraphBase-class.html#similarity_inverse_log_weighted ?
I realize that you could calculate those properties in a python script, but I was hoping for something fast that would take advantage of all the cores with OpenMP.
Thanks again, Alexey
On Thu, Mar 24, 2016 at 8:41 PM, Alexey Strokach ostrokach@gmail.com wrote:
Hi,
Is there a method to calculate the Dice or the Jaccard similarity between *all pairs of vertices* in the graph? Similar to the similarity_dice http://igraph.org/python/doc/igraph.GraphBase-class.html#similarity_dice and similarity_jaccard http://igraph.org/python/doc/igraph.GraphBase-class.html#similarity_jaccard methods in igraph?
I searched through graph_tool documentation, and google, but did not find anything.
Thanks, Alexey
On 24.03.2016 20:52, Alexey Strokach wrote:
And how about similarity_inverse_log_weighted http://igraph.org/python/doc/igraph.GraphBase-class.html#similarity_inverse_log_weighted?
I realize that you could calculate those properties in a python script, but I was hoping for something fast that would take advantage of all the cores with OpenMP.
These functions are not yet implemented. If you want them, please open an issue at the website to help track it.
Best, Tiago
Opened an issue here: https://git.skewed.de/count0/graph-tool/issues/287.
Thanks for all your work on graph_tool!
Alexey
On Thu, Mar 24, 2016 at 9:57 PM, Tiago de Paula Peixoto tiago@skewed.de wrote:
On 24.03.2016 20:52, Alexey Strokach wrote:
And how about similarity_inverse_log_weighted <
http://igraph.org/python/doc/igraph.GraphBase-class.html#similarity_inverse_...
?
I realize that you could calculate those properties in a python script,
but I was hoping for something fast that would take advantage of all the cores with OpenMP.
These functions are not yet implemented. If you want them, please open an issue at the website to help track it.
Best, Tiago
-- Tiago de Paula Peixoto tiago@skewed.de _______________________________________________ graph-tool mailing list graph-tool@skewed.de http://lists.skewed.de/mailman/listinfo/graph-tool
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Alexey Strokach -
Tiago de Paula Peixoto